Topic Overviews

Overview

General introduction to Celldetective’s philosophy and capabilities.

Overview
Preprocessing

Image correction, background subtraction, and channel alignment.

Preprocessing
Segmentation

How Celldetective detects and segments cells and nuclei.

Segmentation
Tracking

Algorithms and parameters for linking cells over time.

Tracking
Measurements

Comprehensive list of available single-cell features and metrics.

Measurements
Signals & Events

Understanding time-series signals and detecting events.

Signals and events
Interactions

Analyzing cell-cell interactions and neighborhoods.

Interactions
Analysis

Data interpretation, plotting, and statistical analysis.

Analysis
Table Exploration

Using the Table Explorer GUI to investigate your data.

Table Explorer (Table UI)