Concepts
This section provides background information and theoretical context for Celldetective. Unlike practical guides or tutorials, these pages explain why things are done a certain way and define the core abstractions used throughout the software.
Data Organization
How Celldetective structures projects, experiments, well folders, and metadata.
Segmentation Strategies
The logic behind separating cell populations and refining masks.
Events
The theoretical framework for defining and detecting single-cell events.
Survival Analysis
How survival theory is adapted for cellular event duration analysis.
Neighborhoods
Definitions of cellular interaction and proximity metrics.