Topic Overviews
===============

.. grid:: 3
    :gutter: 3

    .. grid-item-card:: :icon:`monitor-dashboard` Overview
        :link: overview
        :link-type: doc

        General introduction to Celldetective's philosophy and capabilities.

    .. grid-item-card:: :icon:`image-filter-hdr` Preprocessing
        :link: preprocessing
        :link-type: doc

        Image correction, background subtraction, and channel alignment.

    .. grid-item-card:: :icon:`shape-polygon-plus` Segmentation
        :link: segment
        :link-type: doc

        How Celldetective detects and segments cells and nuclei.

    .. grid-item-card:: :icon:`map-marker-path` Tracking
        :link: track
        :link-type: doc

        Algorithms and parameters for linking cells over time.

    .. grid-item-card:: :icon:`ruler` Measurements
        :link: measure
        :link-type: doc

        Comprehensive list of available single-cell features and metrics.

    .. grid-item-card:: :icon:`pulse` Signals & Events
        :link: signals-and-events
        :link-type: doc

        Understanding time-series signals and detecting events.

    .. grid-item-card:: :icon:`account-group` Interactions
        :link: interactions
        :link-type: doc

        Analyzing cell-cell interactions and neighborhoods.

    .. grid-item-card:: :icon:`chart-scatter-plot` Analysis
        :link: analysis
        :link-type: doc

        Data interpretation, plotting, and statistical analysis.

    .. grid-item-card:: :icon:`table-large` Table Exploration
        :link: table_exploration
        :link-type: doc

        Using the Table Explorer GUI to investigate your data.

.. toctree::
   :hidden:
   :maxdepth: 1
   :caption: Topics

   overview
   preprocessing
   segment
   track
   measure
   signals-and-events
   interactions
   analysis
   table_exploration